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Publications

bioRxiv•Nov 2026 •DOI: 10.1101/2025.05.22.655515v2
timePlex: Increasing mass spectrometry throughput using time-encoded sample multiplexing
bioRxiv•Oct 2026 •DOI: 10.1101/2025.05.22.655509v2
PSMtags improve peptide sequencing and throughput in sensitive proteomics
Journal of Proteome Research•Oct 2026 •DOI: 10.1021/acs.jproteome.6c00166
How to Design 1000-Plex Mass Tags Using the Differential Mass Defect
bioRxiv•Aug 2026 •DOI: 10.1101/2025.05.22.655512v2
JMod: Joint modeling of mass spectra for empowering multiplexed DIA proteomics
bioRxiv•May 2025 •DOI: 10.1101/2025.05.29.656728
Ubiquitin-Proteasome System Dysregulation in Alzheimer’s Disease Impacts Protein Abundance
Nature Methods•Apr 2023 •DOI: 10.1038/s41592-023-01830-1
Nature Methods•Mar 2023 •DOI: 10.1038/s41592-023-01785-3
Initial recommendations for performing, benchmarking and reporting single-cell proteomics experiments
Nature Biotechnology•Jul 2022 •DOI: 10.1038/s41587-022-01389-w
Increasing the throughput of sensitive proteomics by plexDIA
Molecular & Cellular Proteomics•Jan 2022 •DOI: 10.1016/j.mcpro.2021.100179
Scaling Up Single-Cell Proteomics
Cell•Jan 2022 •DOI: 10.1016/j.cell.2021.12.013
Counting protein molecules for single-cell proteomics
Nature Protocols•Oct 2021 •DOI: 10.1038/s41596-021-00616-z
Multiplexed single-cell proteomics using SCoPE2
Current Opinion in Chemical Biology•Feb 2021 •DOI: 10.1016/j.cbpa.2020.04.018
Single-cell protein analysis by mass spectrometry
Genome Biology•Jan 2021 •DOI: 10.1186/s13059-021-02267-5
PLoS Computational Biology•Jul 2019 •DOI: 10.1371/journal.pcbi.1007082
DART-ID increases single-cell proteome coverage
ACS Publications•May 2019 •DOI: 10.1021/acs.jproteome.9b00039
DO-MS: Data-Driven Optimization of Mass Spectrometry Methods
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